GCN4R_demo
Joshua Levy
4/28/2020
Import Library, link anaconda to R studio
reticulate:::conda_list(conda = "auto")## name python
## 1 3 /Users/joshualevy/.julia/conda/3/bin/python
## 2 anaconda2 /anaconda2/bin/python
## 3 bio /anaconda2/envs/bio/bin/python
## 4 gcn4r /anaconda2/envs/gcn4r/bin/python
## 5 interact /anaconda2/envs/interact/bin/python
## 6 interaction_transformer /anaconda2/envs/interaction_transformer/bin/python
## 7 manubot /anaconda2/envs/manubot/bin/python
## 8 mne /anaconda2/envs/mne/bin/python
## 9 mortality /anaconda2/envs/mortality/bin/python
## 10 pathflow /anaconda2/envs/pathflow/bin/python
## 11 py27 /anaconda2/envs/py27/bin/python
## 12 py36 /anaconda2/envs/py36/bin/python
## 13 rqda /anaconda2/envs/rqda/bin/python
## 14 test_installs /anaconda2/envs/test_installs/bin/pythonreticulate::use_condaenv(condaenv = "gcn4r", conda = "/anaconda2/bin/conda")
reticulate:::use_python("/anaconda2/envs/gcn4r/bin/python")
GCN4R<-import_gcn4r()
GCN4R$api## Module(gcn4r.api)Load data
fix convergence or load new data
# alternative data
physician.files<-c("../gcn4r/data/A_physician.csv","../gcn4r/data/X_physician.csv")
# load lawyer data
net.list<-generate.net.list("A_lawyer.csv","X_lawyer.csv")
net.list## $A
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## 69 68 1 38 0 1 1 0 0 1 0 0 0 1
## 70 69 1 31 0 1 1 0 0 0 1 0 1 0
## 71 70 1 26 0 1 1 0 0 1 0 0 1 0Visualize data
# Something is wrong with visualize net, needs debug, see below scripts for more info on plotting actual true graph
visualize.net(net.list)
Load parameters
parameters<-generate_default_parameters()Update parameters
new.parameters<-list(encoder_base="GATConv",
K=3L,
epoch_cluster=100L,
n_layers=1L,
use_mincut=T,
ae_type="ARGA",
custom_dataset="none",
learning_rate=1e-2,
lambda_kl=0.,
lambda_adv=0.001,
lambda_cluster=0.5)
parameters<-update.parameters(parameters,new.parameters)parameters.4<-update.parameters(parameters,list(animation_save_file="animation.pkl"))
animate.model<-cluster.model.fit(parameters.4, net.list)path.dir<-"animate"
if (!dir.exists(path.dir)){
dir.create(path.dir)
}
pandas<-import('pandas')
py <- import_builtins()
animation<-pandas$read_pickle("animation.pkl")
animation.layouts<-data.frame(prcomp(animation[,-ncol(animation)], scale = T)$x[,c(1,2)])
animation.layouts$epoch<-animation$epoch
cl<-extract.clusters(animate.model)
net<-extract.graphs(animate.model)$A.true
V(net)$color <- cl
for (i in 0:max(animation.layouts$epoch)){
n<-ggnetwork(net,layout=as.matrix(animation.layouts[animation.layouts$epoch==i,1:2]))
n$color<-as.character(n$color)
ggplot(n, aes(x = x, y = y, xend = xend, yend = yend)) +
geom_edges(aes(), color = "grey50") +
geom_nodes(aes(color = color)) +
theme_blank()
}Create design matrix to expand factors, update net.list
# WILL DO, WIP!Fit cluster, embedding, classification, generation, or link prediction model
cluster.model<-cluster.model.fit(parameters, net.list)Plot Objective Convergence
plot.diagnostics(cluster.model)## Warning in melt(loss.log, id.vars = "epoch"): The melt generic in data.table
## has been passed a data.frame and will attempt to redirect to the relevant
## reshape2 method; please note that reshape2 is deprecated, and this redirection
## is now deprecated as well. To continue using melt methods from reshape2 while
## both libraries are attached, e.g. melt.list, you can prepend the namespace
## like reshape2::melt(loss.log). In the next version, this warning will become an
## error.
## Warning in melt(loss.log, id.vars = "epoch"): The melt generic in data.table
## has been passed a data.frame and will attempt to redirect to the relevant
## reshape2 method; please note that reshape2 is deprecated, and this redirection
## is now deprecated as well. To continue using melt methods from reshape2 while
## both libraries are attached, e.g. melt.list, you can prepend the namespace
## like reshape2::melt(loss.log). In the next version, this warning will become an
## error.
Summarize Results
results<-extract.results(cluster.model)
graphs<-extract.graphs(cluster.model)
cl<-extract.clusters(cluster.model)
summary(cluster.model)## [1] "Extracted 2 clusters:"
## cl
## 0 2
## 34 37
## [1] "Extracted low dimensional embeddings of shape 71 30"
## [1] "Clustering Vector:"
## [1] 2 0 0 0 0 0 0 2 0 2 2 0 2 0 0 0 0 0 0 0 2 2 0 2 0 2 2 0 0 0 0 0 0 0 0 2 0 2
## [39] 2 2 2 2 2 0 2 0 0 2 2 0 0 2 2 2 2 2 2 0 0 2 2 2 0 2 2 2 2 2 2 2 2
## [1] "Fuzzy Cluster Assignment Matrix:"
## tensor([[ 0.4146, -0.7186, 0.7746],
## [ 1.1437, -0.7913, 0.0164],
## [ 2.3725, -0.9205, -1.2642],
## [ 0.9234, -0.7735, 0.2459],
## [ 1.7557, -0.8593, -0.6232],
## [ 2.0872, -0.8938, -0.9672],
## [ 1.3297, -0.8191, -0.1757],
## [-0.1101, -0.6651, 1.3208],
## [ 0.6412, -0.7480, 0.5422],
## [ 0.5618, -0.7358, 0.6249],
## [-0.1842, -0.6608, 1.3988],
## [ 0.8353, -0.7689, 0.3399],
## [-0.1199, -0.6704, 1.3329],
## [ 2.2276, -0.9103, -1.1119],
## [ 1.3785, -0.8216, -0.2267],
## [ 1.0322, -0.7869, 0.1348],
## [ 0.9332, -0.7746, 0.2365],
## [ 2.8129, -0.9674, -1.7246],
## [ 1.0306, -0.7865, 0.1357],
## [ 0.7654, -0.7578, 0.4101],
## [-0.1119, -0.6690, 1.3239],
## [ 0.2961, -0.7127, 0.8995],
## [ 0.7645, -0.7519, 0.4087],
## [ 0.2024, -0.7003, 0.9971],
## [ 2.2936, -0.9177, -1.1802],
## [ 0.2680, -0.7097, 0.9289],
## [ 0.1346, -0.6932, 1.0673],
## [ 1.7198, -0.8599, -0.5828],
## [ 0.6065, -0.7419, 0.5774],
## [ 1.8473, -0.8688, -0.7177],
## [ 1.6326, -0.8495, -0.4936],
## [ 2.1456, -0.9039, -1.0271],
## [ 1.5097, -0.8373, -0.3658],
## [ 0.7251, -0.7572, 0.4551],
## [ 2.2226, -0.9115, -1.1069],
## [ 0.0883, -0.6872, 1.1147],
## [ 1.0861, -0.7945, 0.0805],
## [-0.0328, -0.6797, 1.2426],
## [-0.3595, -0.6472, 1.5822],
## [-0.6832, -0.6141, 1.9193],
## [-0.1632, -0.6643, 1.3773],
## [ 0.5386, -0.7387, 0.6489],
## [-0.1069, -0.6660, 1.3183],
## [ 1.5003, -0.8262, -0.3529],
## [ 0.5540, -0.7444, 0.6348],
## [ 1.6035, -0.8520, -0.4585],
## [ 0.9172, -0.7729, 0.2530],
## [ 0.2026, -0.7066, 1.0001],
## [-0.8606, -0.5966, 2.1041],
## [ 2.0844, -0.9001, -0.9618],
## [ 0.8510, -0.7720, 0.3208],
## [-0.6035, -0.6215, 1.8362],
## [ 0.3755, -0.7156, 0.8205],
## [-0.3260, -0.6496, 1.5461],
## [-0.5880, -0.6232, 1.8203],
## [-0.7779, -0.6051, 2.0186],
## [-0.9081, -0.5930, 2.1547],
## [ 1.9467, -0.8829, -0.8217],
## [ 2.7393, -0.9632, -1.6480],
## [ 0.4957, -0.7400, 0.6965],
## [-0.7563, -0.6214, 2.0033],
## [-0.5862, -0.6323, 1.8228],
## [ 2.8362, -0.9774, -1.7453],
## [-0.3541, -0.6503, 1.5803],
## [-0.6387, -0.6197, 1.8730],
## [-0.8923, -0.5969, 2.1386],
## [-1.2164, -0.5642, 2.4758],
## [-1.0188, -0.5828, 2.2688],
## [-1.6128, -0.5283, 2.8897],
## [-0.2097, -0.6681, 1.4293],
## [-1.3278, -0.5538, 2.5920]])
## [1] "Generated and Real Networks:"
## $A.pred
## IGRAPH 00488ae DN-- 71 2411 --
## + attr: name (v/c), V1 (v/n), V2 (v/n), V3 (v/n), V4 (v/n), V5 (v/n),
## | V6 (v/n), V7 (v/n), V8 (v/n), V9 (v/n), V10 (v/n), V11 (v/n), V12
## | (v/n)
## + edges from 00488ae (vertex names):
## [1] 1->1 1->2 1->3 1->4 1->5 1->6 1->8 1->10 1->14 1->15 1->16 1->17
## [13] 1->18 1->19 1->20 1->23 1->24 1->25 1->27 1->29 1->30 1->36 1->43 1->44
## [25] 1->47 1->53 1->59 2->1 2->2 2->3 2->4 2->5 2->6 2->7 2->9 2->10
## [37] 2->12 2->14 2->15 2->16 2->17 2->18 2->19 2->20 2->23 2->25 2->28 2->29
## [49] 2->30 2->31 2->32 2->33 2->34 2->35 2->37 2->42 2->44 2->45 2->46 2->47
## [61] 2->50 2->51 2->53 2->58 2->59 2->60 2->63 3->1 3->2 3->3 3->4 3->5
## + ... omitted several edges
##
## $A.true
## IGRAPH 4bda176 DN-- 71 1505 --
## + attr: name (v/c), V1 (v/n), V2 (v/n), V3 (v/n), V4 (v/n), V5 (v/n),
## | V6 (v/n), V7 (v/n), V8 (v/n), V9 (v/n), V10 (v/n), V11 (v/n), V12
## | (v/n)
## + edges from 4bda176 (vertex names):
## [1] 1->1 1->2 1->4 1->5 1->8 1->11 1->16 1->17 1->19 1->20 1->21 1->22
## [13] 1->23 1->24 1->26 1->27 1->29 1->30 1->36 1->39 1->41 1->43 1->54 2->1
## [25] 2->2 2->3 2->4 2->6 2->7 2->10 2->12 2->15 2->16 2->17 2->19 2->20
## [37] 2->22 2->24 2->26 2->27 2->29 2->34 2->42 2->43 2->44 2->48 2->53 2->64
## [49] 3->2 3->3 3->4 3->6 3->14 3->17 3->18 3->19 3->23 3->25 3->28 3->30
## [61] 4->1 4->2 4->3 4->4 4->6 4->9 4->12 4->13 4->14 4->16 4->17 4->19
## + ... omitted several edgesVisualize Results
plot(cluster.model)
Interpret
Attention between Two Individuals
attention.matrices<-visualize.attention(cluster.model,weight.scaling.factor = 4)
# Important Samples and Features per Cluster Assignment
attributions<-interpret.predictors(cluster.model)
parameters.2<-update.parameters(parameters,list(encoder_base="GCNConv"))
cluster.model.2<-cluster.model.fit(parameters.2, net.list)Please run: pip install git+https://github.com/rusty1s/pytorch_geometric.git for motif visualization:
motif.graphs<-extract.motifs(cluster.model.2)
cl<-extract.clusters(cluster.model.2)
predictor.importance<-build.importance.matrix(motif.graphs,cl)
vis.motif(motif.graphs,61L,cl,threshold=0.4)## Warning in vattrs[[name]][index] <- value: number of items to replace is not a
## multiple of replacement length
## [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10]
## [1,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [2,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [3,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [4,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [5,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [6,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [7,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [8,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [9,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [10,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [11,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [12,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [13,] 0.0000000 0.4581873 0 0 0 0 0 0 0 0.0000000
## [14,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [15,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [16,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [17,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [18,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [19,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [20,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [21,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [22,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [23,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [24,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [25,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [26,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [27,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [28,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [29,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [30,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [31,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [32,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [33,] 0.4720956 0.0000000 0 0 0 0 0 0 0 0.4646811
## [34,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [35,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [36,] 0.0000000 0.0000000 0 0 0 0 0 0 0 0.0000000
## [,11] [,12] [,13] [,14] [,15] [,16] [,17] [,18] [,19]
## [1,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [2,] 0.0000000 0 0.4581873 0.0000000 0 0 0 0 0
## [3,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [4,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [5,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [6,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [7,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [8,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [9,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [10,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [11,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [12,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [13,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [14,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [15,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [16,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [17,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [18,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [19,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [20,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [21,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [22,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [23,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [24,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [25,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [26,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [27,] 0.4228493 0 0.0000000 0.0000000 0 0 0 0 0
## [28,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [29,] 0.0000000 0 0.0000000 0.4786376 0 0 0 0 0
## [30,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [31,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [32,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [33,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [34,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [35,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [36,] 0.0000000 0 0.0000000 0.0000000 0 0 0 0 0
## [,20] [,21] [,22] [,23] [,24] [,25] [,26] [,27]
## [1,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [2,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [3,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [4,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [8,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [10,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [11,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.4228493
## [12,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [16,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [20,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.4595252
## [21,] 0.0000000 0.0000000 0 0 0 0.0000000 0.4016918 0.0000000
## [22,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [26,] 0.0000000 0.4016918 0 0 0 0.0000000 0.0000000 0.0000000
## [27,] 0.4595252 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [30,] 0.4421084 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [31,] 0.4368208 0.0000000 0 0 0 0.0000000 0.4785240 0.0000000
## [32,] 0.0000000 0.0000000 0 0 0 0.5054195 0.0000000 0.0000000
## [33,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.4849239
## [34,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0 0 0 0.0000000 0.0000000 0.0000000
## [,28] [,29] [,30] [,31] [,32] [,33] [,34] [,35]
## [1,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4720956 0 0
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [5,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [9,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [10,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4646811 0 0
## [11,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [14,] 0.0000000 0.4786376 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [16,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [18,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [19,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [20,] 0.0000000 0.0000000 0.4421084 0.4368208 0.0000000 0.0000000 0 0
## [21,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [22,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [23,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.5054195 0.0000000 0 0
## [26,] 0.0000000 0.0000000 0.0000000 0.4785240 0.0000000 0.0000000 0 0
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4849239 0 0
## [28,] 0.0000000 0.0000000 0.5223777 0.0000000 0.0000000 0.0000000 0 0
## [29,] 0.0000000 0.6497187 0.0000000 0.0000000 0.0000000 0.4575843 0 0
## [30,] 0.5223777 0.0000000 0.0000000 0.0000000 0.4663638 0.0000000 0 0
## [31,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [32,] 0.0000000 0.0000000 0.4663638 0.0000000 0.0000000 0.0000000 0 0
## [33,] 0.0000000 0.4575843 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [35,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4674311 0 0
## [,36]
## [1,] 0.0000000
## [2,] 0.0000000
## [3,] 0.0000000
## [4,] 0.0000000
## [5,] 0.0000000
## [6,] 0.0000000
## [7,] 0.0000000
## [8,] 0.0000000
## [9,] 0.0000000
## [10,] 0.0000000
## [11,] 0.0000000
## [12,] 0.0000000
## [13,] 0.0000000
## [14,] 0.0000000
## [15,] 0.0000000
## [16,] 0.0000000
## [17,] 0.0000000
## [18,] 0.0000000
## [19,] 0.0000000
## [20,] 0.0000000
## [21,] 0.0000000
## [22,] 0.0000000
## [23,] 0.0000000
## [24,] 0.0000000
## [25,] 0.0000000
## [26,] 0.0000000
## [27,] 0.0000000
## [28,] 0.0000000
## [29,] 0.0000000
## [30,] 0.0000000
## [31,] 0.0000000
## [32,] 0.0000000
## [33,] 0.4674311
## [34,] 0.0000000
## [35,] 0.0000000
## [36,] 0.0000000vis.motif(motif.graphs,8L,cl,threshold=0.4)## Warning in vattrs[[name]][index] <- value: number of items to replace is not a
## multiple of replacement length
## [,1] [,2] [,3] [,4] [,5] [,6] [,7]
## [1,] 0.6949778 0.7265647 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [2,] 0.7265647 0.0000000 0.0000000 0.0000000 0.0000000 0.4957911 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4494246
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4117040 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.4117040 0.6442088 0.0000000 0.0000000
## [6,] 0.0000000 0.4957911 0.0000000 0.0000000 0.0000000 0.6751018 0.0000000
## [7,] 0.0000000 0.0000000 0.4494246 0.0000000 0.0000000 0.0000000 0.6116524
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [10,] 0.4908710 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [11,] 0.5077062 0.0000000 0.0000000 0.0000000 0.4725852 0.0000000 0.0000000
## [12,] 0.5357548 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0.4509288 0.0000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.5077072 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [16,] 0.4996319 0.0000000 0.0000000 0.4325045 0.0000000 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4699971 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0.4506514 0.0000000 0.0000000 0.0000000 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [21,] 0.0000000 0.4873397 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [22,] 0.4829085 0.7254215 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [23,] 0.4786462 0.4874950 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.4492922 0.0000000 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4808059 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.4773931 0.0000000 0.0000000 0.0000000 0.0000000 0.4820920
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4687101
## [31,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5074913
## [32,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [33,] 0.0000000 0.0000000 0.4515150 0.0000000 0.0000000 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4436469 0.0000000 0.5184674
## [35,] 0.5049345 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.5393717 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [39,] 0.4503711 0.4815880 0.0000000 0.0000000 0.5313103 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [43,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4548582 0.0000000 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.5114491 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5086613
## [49,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.5010334 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [55,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4861274
## [57,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [59,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [60,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5193277
## [61,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [62,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,8] [,9] [,10] [,11] [,12] [,13] [,14]
## [1,] 0.0000000 0.0000000 0.4908710 0.5077062 0.5357548 0.0000000 0.0000000
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4509288
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.4725852 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [8,] 0.5413286 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [10,] 0.0000000 0.0000000 0.0000000 0.5041702 0.5115602 0.0000000 0.0000000
## [11,] 0.0000000 0.0000000 0.5041702 0.0000000 0.0000000 0.0000000 0.0000000
## [12,] 0.0000000 0.0000000 0.5115602 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4065867
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4065867 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [16,] 0.0000000 0.0000000 0.5267328 0.0000000 0.5130697 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.4590470 0.0000000 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0.0000000 0.0000000 0.5054573 0.0000000 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [21,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [22,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0.5061330 0.0000000 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [25,] 0.4814661 0.0000000 0.0000000 0.0000000 0.4849244 0.0000000 0.4254767
## [26,] 0.0000000 0.4955610 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.5072840 0.0000000 0.0000000
## [28,] 0.4224497 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [31,] 0.0000000 0.0000000 0.0000000 0.5388948 0.0000000 0.0000000 0.0000000
## [32,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [33,] 0.0000000 0.5054083 0.0000000 0.4723003 0.0000000 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.4993960 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [40,] 0.4298447 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.4542302 0.0000000 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [43,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.4893907 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [49,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.4920028 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.4908194 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [55,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [57,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [59,] 0.0000000 0.4986616 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [60,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [61,] 0.0000000 0.0000000 0.0000000 0.5369460 0.0000000 0.0000000 0.0000000
## [62,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,15] [,16] [,17] [,18] [,19] [,20] [,21] [,22]
## [1,] 0.0000000 0.4996319 0 0.0000000 0.0000000 0 0.0000000 0.4829085
## [2,] 0.5077072 0.0000000 0 0.0000000 0.0000000 0 0.4873397 0.7254215
## [3,] 0.0000000 0.0000000 0 0.0000000 0.4506514 0 0.0000000 0.0000000
## [4,] 0.0000000 0.4325045 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0 0.4699971 0.0000000 0 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [8,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [10,] 0.0000000 0.5267328 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [11,] 0.0000000 0.0000000 0 0.4590470 0.0000000 0 0.0000000 0.0000000
## [12,] 0.0000000 0.5130697 0 0.0000000 0.5054573 0 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [16,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0 0.0000000 0.7242762 0 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0 0.7242762 0.0000000 0 0.4839371 0.0000000
## [20,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [21,] 0.0000000 0.0000000 0 0.0000000 0.4839371 0 0.6416107 0.0000000
## [22,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [25,] 0.0000000 0.5121178 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [27,] 0.5230365 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0 0.4551012 0.0000000 0 0.0000000 0.0000000
## [30,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.4990283 0.0000000
## [31,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.5212830 0.0000000
## [32,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [33,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [35,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [36,] 0.5163572 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0 0.5085890 0.0000000 0 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0 0.0000000 0.4693757 0 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [43,] 0.4799574 0.4098530 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [44,] 0.4212999 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [49,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.4189967 0.0000000
## [53,] 0.0000000 0.0000000 0 0.0000000 0.5457364 0 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.4338508
## [55,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [56,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [57,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [58,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [59,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [60,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [61,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [62,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [63,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [64,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [65,] 0.0000000 0.0000000 0 0.0000000 0.0000000 0 0.0000000 0.0000000
## [,23] [,24] [,25] [,26] [,27] [,28] [,29]
## [1,] 0.4786462 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [2,] 0.4874950 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.4773931
## [3,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [4,] 0.0000000 0.4492922 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.000000 0.4808059 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.4820920
## [8,] 0.0000000 0.0000000 0.4814661 0.000000 0.0000000 0.4224497 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.495561 0.0000000 0.0000000 0.0000000
## [10,] 0.5061330 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [11,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [12,] 0.0000000 0.0000000 0.4849244 0.000000 0.5072840 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0.4254767 0.000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.000000 0.5230365 0.0000000 0.0000000
## [16,] 0.0000000 0.0000000 0.5121178 0.000000 0.0000000 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.4551012
## [19,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [21,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [22,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [30,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [31,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [32,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [33,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.0000000 0.4287046 0.000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.4379485 0.000000 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [43,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.5196504 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [49,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [55,] 0.5077840 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [57,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [59,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [60,] 0.0000000 0.0000000 0.4083211 0.000000 0.0000000 0.0000000 0.0000000
## [61,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [62,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.0000000 0.0000000
## [,30] [,31] [,32] [,33] [,34] [,35] [,36]
## [1,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5049345 0.0000000
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.4515150 0.0000000 0.0000000 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4436469 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [7,] 0.4687101 0.5074913 0.0000000 0.0000000 0.5184674 0.0000000 0.0000000
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.5054083 0.0000000 0.0000000 0.0000000
## [10,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [11,] 0.0000000 0.5388948 0.0000000 0.4723003 0.0000000 0.0000000 0.0000000
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.5163572
## [16,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [21,] 0.4990283 0.5212830 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [22,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.4287046 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [31,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [32,] 0.0000000 0.0000000 0.0000000 0.4989023 0.0000000 0.0000000 0.0000000
## [33,] 0.0000000 0.0000000 0.4989023 0.0000000 0.0000000 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [43,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [49,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [55,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [57,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [59,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [60,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [61,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [62,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,37] [,38] [,39] [,40] [,41] [,42] [,43]
## [1,] 0.0000000 0.0000000 0.4503711 0.0000000 0.0000000 0 0.0000000
## [2,] 0.5393717 0.0000000 0.4815880 0.0000000 0.0000000 0 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [5,] 0.0000000 0.0000000 0.5313103 0.0000000 0.0000000 0 0.4548582
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [8,] 0.0000000 0.0000000 0.0000000 0.4298447 0.0000000 0 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [10,] 0.4993960 0.0000000 0.0000000 0.0000000 0.4542302 0 0.0000000
## [11,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.4799574
## [16,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.4098530
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.5085890 0.0000000 0 0.0000000
## [19,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4693757 0 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [21,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [22,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4379485 0 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.5196504
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [31,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [32,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [33,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [35,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.4741897
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [43,] 0.0000000 0.0000000 0.4741897 0.0000000 0.0000000 0 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [49,] 0.5482449 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [55,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [57,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [59,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [60,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [61,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [62,] 0.5537853 0.4332898 0.0000000 0.0000000 0.0000000 0 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [,44] [,45] [,46] [,47] [,48] [,49] [,50] [,51]
## [1,] 0.0000000 0 0.0000000 0.5114491 0.0000000 0.0000000 0 0.0000000
## [2,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [3,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [4,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [5,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [6,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [7,] 0.0000000 0 0.0000000 0.0000000 0.5086613 0.0000000 0 0.0000000
## [8,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [9,] 0.0000000 0 0.4893907 0.0000000 0.0000000 0.0000000 0 0.4920028
## [10,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [11,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [12,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [13,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [14,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [15,] 0.4212999 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [16,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [17,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [18,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [19,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [20,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [21,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [22,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [23,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [24,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [25,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [26,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [27,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [28,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [29,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [30,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [31,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [32,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [33,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [34,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [35,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [36,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [37,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.5482449 0 0.0000000
## [38,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [39,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [40,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [41,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [42,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [43,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [44,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [45,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [46,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [47,] 0.0000000 0 0.0000000 0.6692761 0.0000000 0.0000000 0 0.0000000
## [48,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [49,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [50,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [51,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [52,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [53,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [54,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [55,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [56,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [57,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [58,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [59,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [60,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [61,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [62,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [63,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [64,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [65,] 0.0000000 0 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0000000
## [,52] [,53] [,54] [,55] [,56] [,57] [,58] [,59]
## [1,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [2,] 0.5010334 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.4861274 0 0 0.0000000
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [9,] 0.0000000 0.4908194 0.0000000 0.0000000 0.0000000 0 0 0.4986616
## [10,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [11,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [16,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [17,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [18,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [19,] 0.0000000 0.5457364 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [20,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [21,] 0.4189967 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [22,] 0.0000000 0.0000000 0.4338508 0.0000000 0.0000000 0 0 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.5077840 0.0000000 0 0 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [31,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [32,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [33,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [35,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [43,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [49,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [50,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [55,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [56,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [57,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [58,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [59,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [60,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [61,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [62,] 0.0000000 0.0000000 0.0000000 0.4807629 0.0000000 0 0 0.0000000
## [63,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [64,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [65,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0 0.0000000
## [,60] [,61] [,62] [,63] [,64] [,65]
## [1,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [2,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [3,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [4,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [5,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [6,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [7,] 0.5193277 0.0000000 0.0000000 0 0.0000000 0
## [8,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [9,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [10,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [11,] 0.0000000 0.5369460 0.0000000 0 0.0000000 0
## [12,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [13,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [14,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [15,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [16,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [17,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [18,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [19,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [20,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [21,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [22,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [23,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [24,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [25,] 0.4083211 0.0000000 0.0000000 0 0.0000000 0
## [26,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [27,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [28,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [29,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [30,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [31,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [32,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [33,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [34,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [35,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [36,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [37,] 0.0000000 0.0000000 0.5537853 0 0.0000000 0
## [38,] 0.0000000 0.0000000 0.4332898 0 0.0000000 0
## [39,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [40,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [41,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [42,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [43,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [44,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [45,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [46,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [47,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [48,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [49,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [50,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [51,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [52,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [53,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [54,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [55,] 0.0000000 0.0000000 0.4807629 0 0.0000000 0
## [56,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [57,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [58,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [59,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [60,] 0.0000000 0.5481769 0.0000000 0 0.0000000 0
## [61,] 0.5481769 0.7570822 0.0000000 0 0.0000000 0
## [62,] 0.0000000 0.0000000 0.0000000 0 0.5488373 0
## [63,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0
## [64,] 0.0000000 0.0000000 0.5488373 0 0.0000000 0
## [65,] 0.0000000 0.0000000 0.0000000 0 0.0000000 0vis.motif(motif.graphs,5L,cl,threshold=0.5, weight.scaling.factor=1.5)## Warning in vattrs[[name]][index] <- value: number of items to replace is not a
## multiple of replacement length
## [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9]
## [1,] 0.6045539 0.0000000 0 0 0.0000000 0.0000000 0.0000000 0 0
## [2,] 0.0000000 0.0000000 0 0 0.6544513 0.0000000 0.0000000 0 0
## [3,] 0.0000000 0.0000000 0 0 0.0000000 0.0000000 0.0000000 0 0
## [4,] 0.0000000 0.0000000 0 0 0.0000000 0.0000000 0.0000000 0 0
## [5,] 0.0000000 0.6544513 0 0 0.0000000 0.5095003 0.0000000 0 0
## [6,] 0.0000000 0.0000000 0 0 0.5095003 0.0000000 0.0000000 0 0
## [7,] 0.0000000 0.0000000 0 0 0.0000000 0.0000000 0.6298417 0 0
## [8,] 0.0000000 0.0000000 0 0 0.0000000 0.0000000 0.0000000 0 0
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## [55,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [56,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [57,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [58,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [59,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [60,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [61,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [62,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [63,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
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## [66,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [67,] 0 0 0 0 0 0.0000000 0.0000000 0 0 0 0
## [,48] [,49] [,50] [,51] [,52] [,53] [,54] [,55] [,56] [,57] [,58]
## [1,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [3,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [4,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [5,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [6,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [7,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [8,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [9,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [10,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [11,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [12,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [13,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [14,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [15,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [16,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [17,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [20,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [21,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [22,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [23,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [24,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [25,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [26,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [27,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [28,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [30,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [32,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [33,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [34,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [35,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [37,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [38,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [39,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [40,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [42,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [43,] 0 0.0000000 0 0 0 0.5374276 0 0 0 0 0
## [44,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [45,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
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## [47,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [48,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [49,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [50,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [51,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [52,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [53,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [54,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [55,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [56,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [57,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [58,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [59,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [60,] 0 0.5002547 0 0 0 0.0000000 0 0 0 0 0
## [61,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [62,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [63,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [64,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [65,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [66,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [67,] 0 0.0000000 0 0 0 0.0000000 0 0 0 0 0
## [,59] [,60] [,61] [,62] [,63] [,64] [,65] [,66] [,67]
## [1,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [2,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [3,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [4,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [5,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.5019772 0
## [6,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [7,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [8,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [9,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [10,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [11,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [12,] 0.5392568 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [13,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [14,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [15,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [16,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [17,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [18,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [19,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [20,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [21,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [22,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [23,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [24,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [25,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [26,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [27,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [28,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [29,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.5087680 0
## [30,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [31,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [32,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [33,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [34,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [35,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [36,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [37,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [38,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [39,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [40,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [41,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [42,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [43,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [44,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [45,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [46,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [47,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [48,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [49,] 0.0000000 0.5002547 0.0000000 0 0 0.0000000 0 0.0000000 0
## [50,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [51,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [52,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [53,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [54,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [55,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [56,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [57,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [58,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [59,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [60,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [61,] 0.0000000 0.0000000 0.0000000 0 0 0.5140417 0 0.0000000 0
## [62,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [63,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [64,] 0.0000000 0.0000000 0.5140417 0 0 0.0000000 0 0.0000000 0
## [65,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [66,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0
## [67,] 0.0000000 0.0000000 0.0000000 0 0 0.0000000 0 0.0000000 0vis.motif(motif.graphs,71L,cl,threshold=0.2)## Warning in vattrs[[name]][index] <- value: number of items to replace is not a
## multiple of replacement length
## [,1] [,2] [,3] [,4] [,5] [,6] [,7]
## [1,] 0.2727942 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [2,] 0.0000000 0.2929959 0.2940302 0.2359970 0.3115939 0.0000000 0.2310608
## [3,] 0.0000000 0.2940302 0.3062719 0.2902843 0.0000000 0.2670122 0.0000000
## [4,] 0.0000000 0.2359970 0.2902843 0.3285599 0.0000000 0.2371763 0.0000000
## [5,] 0.0000000 0.3115939 0.0000000 0.0000000 0.2514231 0.2841794 0.0000000
## [6,] 0.0000000 0.0000000 0.2670122 0.2371763 0.2841794 0.2846006 0.0000000
## [7,] 0.0000000 0.2310608 0.0000000 0.0000000 0.0000000 0.0000000 0.2733311
## [8,] 0.0000000 0.0000000 0.2308270 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.2538945 0.0000000 0.0000000 0.2892167 0.0000000 0.2824294
## [10,] 0.0000000 0.0000000 0.2868458 0.2414299 0.0000000 0.0000000 0.2676528
## [11,] 0.2763932 0.0000000 0.0000000 0.2596075 0.0000000 0.0000000 0.2281884
## [12,] 0.0000000 0.0000000 0.2781259 0.0000000 0.0000000 0.3168457 0.0000000
## [13,] 0.0000000 0.2229806 0.3061752 0.2535276 0.0000000 0.2509568 0.0000000
## [14,] 0.0000000 0.2780854 0.2999203 0.2433081 0.0000000 0.0000000 0.2578702
## [15,] 0.0000000 0.2930514 0.2904308 0.2665063 0.0000000 0.3011561 0.0000000
## [16,] 0.0000000 0.2551607 0.2507694 0.2732250 0.2886642 0.0000000 0.0000000
## [17,] 0.0000000 0.3248015 0.0000000 0.2379971 0.0000000 0.0000000 0.0000000
## [18,] 0.2697006 0.3162547 0.2860756 0.2643516 0.0000000 0.0000000 0.0000000
## [19,] 0.0000000 0.2678658 0.0000000 0.2649422 0.2845047 0.0000000 0.3204299
## [20,] 0.0000000 0.2620410 0.3219216 0.2428502 0.0000000 0.2800677 0.2425137
## [21,] 0.0000000 0.3053572 0.2451202 0.2529956 0.3333340 0.2475016 0.2547912
## [22,] 0.0000000 0.2815362 0.2808717 0.2527642 0.2691328 0.3103844 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.2511855 0.2681368 0.2619074 0.0000000
## [24,] 0.0000000 0.2686261 0.0000000 0.0000000 0.0000000 0.2536310 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.2780025 0.2266423 0.2389374 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2884336 0.2663537 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2493970 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0.2834126 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.2964824 0.0000000 0.0000000 0.0000000 0.0000000 0.2598993
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [31,] 0.2290739 0.2923429 0.0000000 0.0000000 0.2588657 0.0000000 0.0000000
## [32,] 0.2600871 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [33,] 0.0000000 0.2832397 0.0000000 0.2514208 0.0000000 0.0000000 0.2596428
## [34,] 0.0000000 0.0000000 0.2257290 0.3079254 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.2705699 0.2846849 0.0000000 0.0000000 0.0000000 0.2593212
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.2372887 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.2631327 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2804528
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2397072 0.2640409 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2612481 0.0000000 0.0000000
## [41,] 0.2617948 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2719995
## [42,] 0.0000000 0.2751198 0.0000000 0.0000000 0.2888660 0.0000000 0.0000000
## [43,] 0.2717584 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [44,] 0.2966454 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [45,] 0.2851948 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2325594 0.2405936 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.2756810 0.0000000 0.0000000 0.0000000 0.0000000
## [49,] 0.2444049 0.0000000 0.0000000 0.2738666 0.0000000 0.2866948 0.2617295
## [50,] 0.2918953 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [51,] 0.5172723 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.2842390 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [53,] 0.2785998 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.2885930 0.0000000 0.0000000 0.0000000
## [,8] [,9] [,10] [,11] [,12] [,13] [,14]
## [1,] 0.0000000 0.0000000 0.0000000 0.2763932 0.0000000 0.0000000 0.0000000
## [2,] 0.0000000 0.2538945 0.0000000 0.0000000 0.0000000 0.2229806 0.2780854
## [3,] 0.2308270 0.0000000 0.2868458 0.0000000 0.2781259 0.3061752 0.2999203
## [4,] 0.0000000 0.0000000 0.2414299 0.2596075 0.0000000 0.2535276 0.2433081
## [5,] 0.0000000 0.2892167 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.3168457 0.2509568 0.0000000
## [7,] 0.0000000 0.2824294 0.2676528 0.2281884 0.0000000 0.0000000 0.2578702
## [8,] 0.2897279 0.0000000 0.2331645 0.0000000 0.0000000 0.2567117 0.2414145
## [9,] 0.0000000 0.2419749 0.2503707 0.2858309 0.0000000 0.0000000 0.2314292
## [10,] 0.2331645 0.2503707 0.2432317 0.2776884 0.2729585 0.2780904 0.2500455
## [11,] 0.0000000 0.2858309 0.2776884 0.3276161 0.2715529 0.2718736 0.2509157
## [12,] 0.0000000 0.0000000 0.2729585 0.2715529 0.2498304 0.2821352 0.0000000
## [13,] 0.2567117 0.0000000 0.2780904 0.2718736 0.2821352 0.2418320 0.2729288
## [14,] 0.2414145 0.2314292 0.2500455 0.2509157 0.0000000 0.2729288 0.2501434
## [15,] 0.0000000 0.0000000 0.2653465 0.2767592 0.2932407 0.2694531 0.2458890
## [16,] 0.0000000 0.0000000 0.0000000 0.3179466 0.3003484 0.0000000 0.2935473
## [17,] 0.0000000 0.3176427 0.0000000 0.2771120 0.0000000 0.0000000 0.2723913
## [18,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2909348 0.2813642 0.2616550
## [19,] 0.0000000 0.2689426 0.0000000 0.2523122 0.0000000 0.0000000 0.0000000
## [20,] 0.2727464 0.2875717 0.2551647 0.2265175 0.0000000 0.2583573 0.2886717
## [21,] 0.2309449 0.2850071 0.2928435 0.3308459 0.2635977 0.2748485 0.2693322
## [22,] 0.2387801 0.2649107 0.0000000 0.2488498 0.2708197 0.2314558 0.0000000
## [23,] 0.0000000 0.0000000 0.2364147 0.2903196 0.3189315 0.2598960 0.2471635
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2715765
## [25,] 0.0000000 0.0000000 0.0000000 0.2930772 0.3062740 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.2588566 0.0000000 0.2235378 0.2623001 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.2463625 0.0000000 0.0000000 0.0000000
## [28,] 0.2682859 0.0000000 0.2488816 0.2765076 0.2619435 0.2636643 0.2697018
## [29,] 0.0000000 0.0000000 0.0000000 0.3126530 0.2583780 0.0000000 0.0000000
## [30,] 0.0000000 0.0000000 0.2768512 0.3095671 0.0000000 0.3083497 0.0000000
## [31,] 0.0000000 0.2490463 0.0000000 0.3222824 0.0000000 0.0000000 0.2572428
## [32,] 0.0000000 0.2697161 0.0000000 0.2714449 0.0000000 0.0000000 0.2846896
## [33,] 0.0000000 0.2653965 0.0000000 0.2950480 0.0000000 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.2842993 0.2967985 0.0000000 0.2380260 0.2564377
## [35,] 0.0000000 0.2684541 0.0000000 0.2816236 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2781583 0.0000000 0.0000000
## [37,] 0.2762564 0.0000000 0.2536639 0.2289969 0.0000000 0.2998214 0.2563898
## [38,] 0.0000000 0.2345753 0.0000000 0.2294319 0.0000000 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0.2756050 0.0000000 0.0000000 0.2719816 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.2780822 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.2755319 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.2615873 0.0000000 0.4202537 0.0000000 0.0000000 0.0000000
## [43,] 0.2408387 0.0000000 0.0000000 0.2172437 0.0000000 0.2713111 0.0000000
## [44,] 0.0000000 0.5127517 0.0000000 0.2379614 0.0000000 0.0000000 0.0000000
## [45,] 0.0000000 0.0000000 0.0000000 0.2785166 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.2586527 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.2834598 0.0000000 0.2606090 0.0000000 0.0000000
## [48,] 0.2769596 0.0000000 0.0000000 0.2535016 0.0000000 0.2697998 0.0000000
## [49,] 0.0000000 0.2901938 0.0000000 0.2963600 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.2699155 0.2800078 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.3451510 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.2732410 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,15] [,16] [,17] [,18] [,19] [,20] [,21]
## [1,] 0.0000000 0.0000000 0.0000000 0.2697006 0.0000000 0.0000000 0.0000000
## [2,] 0.2930514 0.2551607 0.3248015 0.3162547 0.2678658 0.2620410 0.3053572
## [3,] 0.2904308 0.2507694 0.0000000 0.2860756 0.0000000 0.3219216 0.2451202
## [4,] 0.2665063 0.2732250 0.2379971 0.2643516 0.2649422 0.2428502 0.2529956
## [5,] 0.0000000 0.2886642 0.0000000 0.0000000 0.2845047 0.0000000 0.3333340
## [6,] 0.3011561 0.0000000 0.0000000 0.0000000 0.0000000 0.2800677 0.2475016
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.3204299 0.2425137 0.2547912
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2727464 0.2309449
## [9,] 0.0000000 0.0000000 0.3176427 0.0000000 0.2689426 0.2875717 0.2850071
## [10,] 0.2653465 0.0000000 0.0000000 0.0000000 0.0000000 0.2551647 0.2928435
## [11,] 0.2767592 0.3179466 0.2771120 0.0000000 0.2523122 0.2265175 0.3308459
## [12,] 0.2932407 0.3003484 0.0000000 0.2909348 0.0000000 0.0000000 0.2635977
## [13,] 0.2694531 0.0000000 0.0000000 0.2813642 0.0000000 0.2583573 0.2748485
## [14,] 0.2458890 0.2935473 0.2723913 0.2616550 0.0000000 0.2886717 0.2693322
## [15,] 0.3448344 0.2596496 0.2636545 0.2966582 0.0000000 0.2310198 0.2432450
## [16,] 0.2596496 0.2992473 0.2626838 0.2397104 0.2764964 0.2870855 0.2649098
## [17,] 0.2636545 0.2626838 0.2567433 0.0000000 0.0000000 0.2690980 0.2962291
## [18,] 0.2966582 0.2397104 0.0000000 0.2972235 0.0000000 0.0000000 0.2872478
## [19,] 0.0000000 0.2764964 0.0000000 0.0000000 0.2405733 0.0000000 0.0000000
## [20,] 0.2310198 0.2870855 0.2690980 0.0000000 0.0000000 0.2477167 0.3030622
## [21,] 0.2432450 0.2649098 0.2962291 0.2872478 0.0000000 0.3030622 0.2870809
## [22,] 0.0000000 0.2361543 0.2371096 0.0000000 0.3249891 0.2722960 0.2513342
## [23,] 0.2977462 0.0000000 0.0000000 0.2902207 0.0000000 0.2865540 0.2822933
## [24,] 0.2687811 0.2662469 0.0000000 0.3401161 0.0000000 0.2872849 0.2376781
## [25,] 0.0000000 0.2490404 0.2728011 0.2572360 0.0000000 0.2836397 0.2729772
## [26,] 0.3212359 0.0000000 0.0000000 0.2733089 0.0000000 0.0000000 0.2845713
## [27,] 0.0000000 0.0000000 0.2408844 0.2808797 0.2532020 0.2567138 0.2444465
## [28,] 0.2444068 0.0000000 0.0000000 0.2751488 0.0000000 0.0000000 0.2535541
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2536327 0.2400006
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2881168 0.2444499
## [31,] 0.0000000 0.0000000 0.0000000 0.3011491 0.0000000 0.0000000 0.2858648
## [32,] 0.0000000 0.2820649 0.3220496 0.0000000 0.0000000 0.2592557 0.2703158
## [33,] 0.0000000 0.0000000 0.2881420 0.3046169 0.2777614 0.2865149 0.2752347
## [34,] 0.2836493 0.2623414 0.0000000 0.0000000 0.0000000 0.2800061 0.2668402
## [35,] 0.2621929 0.2425106 0.3065210 0.0000000 0.0000000 0.2161845 0.2693655
## [36,] 0.0000000 0.0000000 0.0000000 0.2550646 0.2813526 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2521357 0.0000000
## [38,] 0.0000000 0.0000000 0.2891140 0.3027676 0.0000000 0.0000000 0.2667370
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.2498620 0.0000000 0.0000000 0.0000000
## [41,] 0.0000000 0.0000000 0.2193907 0.0000000 0.2946490 0.3079538 0.2725395
## [42,] 0.0000000 0.0000000 0.0000000 0.2973841 0.0000000 0.0000000 0.4713217
## [43,] 0.0000000 0.2802761 0.2807106 0.2915648 0.2196399 0.2730837 0.2812048
## [44,] 0.0000000 0.2469848 0.2483147 0.3024883 0.2697182 0.2422631 0.2928984
## [45,] 0.0000000 0.0000000 0.3126725 0.0000000 0.0000000 0.2689707 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2396201
## [48,] 0.3173082 0.0000000 0.0000000 0.2501726 0.0000000 0.2659968 0.0000000
## [49,] 0.0000000 0.0000000 0.0000000 0.3020837 0.0000000 0.4806145 0.2737182
## [50,] 0.0000000 0.0000000 0.2679772 0.2859029 0.2720901 0.3099036 0.2893078
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2950438 0.0000000
## [52,] 0.0000000 0.2916809 0.2384648 0.2911390 0.0000000 0.0000000 0.2449108
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2786048
## [54,] 0.2778121 0.0000000 0.2565254 0.0000000 0.0000000 0.0000000 0.0000000
## [,22] [,23] [,24] [,25] [,26] [,27] [,28]
## [1,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [2,] 0.2815362 0.0000000 0.2686261 0.0000000 0.0000000 0.0000000 0.0000000
## [3,] 0.2808717 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2834126
## [4,] 0.2527642 0.2511855 0.0000000 0.2780025 0.0000000 0.0000000 0.0000000
## [5,] 0.2691328 0.2681368 0.0000000 0.2266423 0.2884336 0.2493970 0.0000000
## [6,] 0.3103844 0.2619074 0.2536310 0.2389374 0.2663537 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [8,] 0.2387801 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2682859
## [9,] 0.2649107 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [10,] 0.0000000 0.2364147 0.0000000 0.0000000 0.2588566 0.0000000 0.2488816
## [11,] 0.2488498 0.2903196 0.0000000 0.2930772 0.0000000 0.2463625 0.2765076
## [12,] 0.2708197 0.3189315 0.0000000 0.3062740 0.2235378 0.0000000 0.2619435
## [13,] 0.2314558 0.2598960 0.0000000 0.0000000 0.2623001 0.0000000 0.2636643
## [14,] 0.0000000 0.2471635 0.2715765 0.0000000 0.0000000 0.0000000 0.2697018
## [15,] 0.0000000 0.2977462 0.2687811 0.0000000 0.3212359 0.0000000 0.2444068
## [16,] 0.2361543 0.0000000 0.2662469 0.2490404 0.0000000 0.0000000 0.0000000
## [17,] 0.2371096 0.0000000 0.0000000 0.2728011 0.0000000 0.2408844 0.0000000
## [18,] 0.0000000 0.2902207 0.3401161 0.2572360 0.2733089 0.2808797 0.2751488
## [19,] 0.3249891 0.0000000 0.0000000 0.0000000 0.0000000 0.2532020 0.0000000
## [20,] 0.2722960 0.2865540 0.2872849 0.2836397 0.0000000 0.2567138 0.0000000
## [21,] 0.2513342 0.2822933 0.2376781 0.2729772 0.2845713 0.2444465 0.2535541
## [22,] 0.3149614 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2432400
## [23,] 0.0000000 0.2685883 0.3093128 0.2852858 0.2842447 0.0000000 0.2186825
## [24,] 0.0000000 0.3093128 0.2505780 0.2622403 0.2636093 0.3059172 0.0000000
## [25,] 0.0000000 0.2852858 0.2622403 0.3176233 0.3200047 0.3375757 0.0000000
## [26,] 0.0000000 0.2842447 0.2636093 0.3200047 0.3199723 0.2682133 0.0000000
## [27,] 0.0000000 0.0000000 0.3059172 0.3375757 0.2682133 0.2954807 0.2947574
## [28,] 0.2432400 0.2186825 0.0000000 0.0000000 0.0000000 0.2947574 0.2786408
## [29,] 0.0000000 0.0000000 0.2433994 0.0000000 0.0000000 0.0000000 0.2903275
## [30,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2577516 0.0000000
## [31,] 0.0000000 0.0000000 0.2835923 0.0000000 0.0000000 0.0000000 0.0000000
## [32,] 0.2724791 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [33,] 0.2628707 0.0000000 0.0000000 0.2841951 0.0000000 0.2793958 0.0000000
## [34,] 0.2595108 0.2180248 0.2428231 0.0000000 0.0000000 0.0000000 0.2742123
## [35,] 0.2987537 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.2792742 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2350174
## [38,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [39,] 0.0000000 0.3019367 0.2952429 0.2558707 0.2747528 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.5341605 0.2528379 0.2997911 0.2524306 0.0000000
## [41,] 0.0000000 0.0000000 0.0000000 0.2801818 0.0000000 0.0000000 0.0000000
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2659812 0.0000000
## [43,] 0.4654570 0.0000000 0.0000000 0.2575015 0.0000000 0.0000000 0.0000000
## [44,] 0.2821580 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2812990
## [45,] 0.2790076 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.2899864 0.2749055 0.2973556 0.2753157 0.2747746 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2543082
## [49,] 0.2749795 0.0000000 0.2204416 0.0000000 0.0000000 0.0000000 0.0000000
## [50,] 0.0000000 0.2894952 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [51,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.2637964 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.3017595 0.0000000 0.0000000 0.2656326 0.0000000 0.0000000
## [,29] [,30] [,31] [,32] [,33] [,34] [,35]
## [1,] 0.0000000 0.0000000 0.2290739 0.2600871 0.0000000 0.0000000 0.0000000
## [2,] 0.2964824 0.0000000 0.2923429 0.0000000 0.2832397 0.0000000 0.2705699
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2257290 0.2846849
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2514208 0.3079254 0.0000000
## [5,] 0.0000000 0.0000000 0.2588657 0.0000000 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [7,] 0.2598993 0.0000000 0.0000000 0.0000000 0.2596428 0.0000000 0.2593212
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.2490463 0.2697161 0.2653965 0.0000000 0.2684541
## [10,] 0.0000000 0.2768512 0.0000000 0.0000000 0.0000000 0.2842993 0.0000000
## [11,] 0.3126530 0.3095671 0.3222824 0.2714449 0.2950480 0.2967985 0.2816236
## [12,] 0.2583780 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.3083497 0.0000000 0.0000000 0.0000000 0.2380260 0.0000000
## [14,] 0.0000000 0.0000000 0.2572428 0.2846896 0.0000000 0.2564377 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2836493 0.2621929
## [16,] 0.0000000 0.0000000 0.0000000 0.2820649 0.0000000 0.2623414 0.2425106
## [17,] 0.0000000 0.0000000 0.0000000 0.3220496 0.2881420 0.0000000 0.3065210
## [18,] 0.0000000 0.0000000 0.3011491 0.0000000 0.3046169 0.0000000 0.0000000
## [19,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2777614 0.0000000 0.0000000
## [20,] 0.2536327 0.2881168 0.0000000 0.2592557 0.2865149 0.2800061 0.2161845
## [21,] 0.2400006 0.2444499 0.2858648 0.2703158 0.2752347 0.2668402 0.2693655
## [22,] 0.0000000 0.0000000 0.0000000 0.2724791 0.2628707 0.2595108 0.2987537
## [23,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2180248 0.0000000
## [24,] 0.2433994 0.0000000 0.2835923 0.0000000 0.0000000 0.2428231 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2841951 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.2577516 0.0000000 0.0000000 0.2793958 0.0000000 0.0000000
## [28,] 0.2903275 0.0000000 0.0000000 0.0000000 0.0000000 0.2742123 0.0000000
## [29,] 0.2025961 0.2465430 0.0000000 0.0000000 0.2710970 0.0000000 0.2951424
## [30,] 0.2465430 0.2378574 0.0000000 0.2639666 0.2425004 0.2694784 0.0000000
## [31,] 0.0000000 0.0000000 0.2644945 0.2417964 0.2947790 0.2923426 0.0000000
## [32,] 0.0000000 0.2639666 0.2417964 0.3002247 0.2709953 0.2822212 0.2986846
## [33,] 0.2710970 0.2425004 0.2947790 0.2709953 0.2627359 0.3091951 0.2550984
## [34,] 0.0000000 0.2694784 0.2923426 0.2822212 0.3091951 0.2125894 0.0000000
## [35,] 0.2951424 0.0000000 0.0000000 0.2986846 0.2550984 0.0000000 0.2841403
## [36,] 0.3078153 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.4758774 0.2660090 0.0000000 0.0000000 0.2356514 0.2390901
## [38,] 0.0000000 0.0000000 0.0000000 0.2857389 0.2486489 0.0000000 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2722985 0.2849007 0.0000000
## [40,] 0.0000000 0.2562148 0.2268721 0.2391536 0.3272553 0.0000000 0.2543385
## [41,] 0.2334614 0.2739689 0.2663501 0.2620682 0.2379100 0.2897565 0.0000000
## [42,] 0.2440591 0.0000000 0.0000000 0.2550332 0.2699743 0.0000000 0.0000000
## [43,] 0.2709876 0.2713046 0.3058427 0.2507519 0.2444418 0.0000000 0.2970957
## [44,] 0.0000000 0.2723324 0.2843532 0.3244484 0.2688493 0.0000000 0.0000000
## [45,] 0.0000000 0.2448459 0.2659988 0.2343823 0.2537622 0.0000000 0.2741421
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [49,] 0.2516631 0.2894443 0.4711804 0.2604830 0.2801802 0.0000000 0.0000000
## [50,] 0.0000000 0.0000000 0.4749111 0.2464078 0.3002079 0.0000000 0.0000000
## [51,] 0.0000000 0.2410022 0.2621258 0.2715413 0.0000000 0.0000000 0.4739264
## [52,] 0.0000000 0.0000000 0.0000000 0.2561422 0.3033843 0.0000000 0.0000000
## [53,] 0.0000000 0.0000000 0.2846988 0.0000000 0.0000000 0.0000000 0.0000000
## [54,] 0.0000000 0.0000000 0.0000000 0.2924328 0.0000000 0.0000000 0.0000000
## [,36] [,37] [,38] [,39] [,40] [,41] [,42]
## [1,] 0.0000000 0.0000000 0.2631327 0.0000000 0.0000000 0.2617948 0.0000000
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2751198
## [3,] 0.0000000 0.2372887 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [5,] 0.0000000 0.0000000 0.0000000 0.2397072 0.2612481 0.0000000 0.2888660
## [6,] 0.0000000 0.0000000 0.0000000 0.2640409 0.0000000 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0.2804528 0.0000000 0.0000000 0.2719995 0.0000000
## [8,] 0.0000000 0.2762564 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.2345753 0.0000000 0.0000000 0.0000000 0.2615873
## [10,] 0.0000000 0.2536639 0.0000000 0.2756050 0.0000000 0.0000000 0.0000000
## [11,] 0.0000000 0.2289969 0.2294319 0.0000000 0.2780822 0.2755319 0.4202537
## [12,] 0.2781583 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.2998214 0.0000000 0.2719816 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.2563898 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [16,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [17,] 0.0000000 0.0000000 0.2891140 0.0000000 0.0000000 0.2193907 0.0000000
## [18,] 0.2550646 0.0000000 0.3027676 0.0000000 0.2498620 0.0000000 0.2973841
## [19,] 0.2813526 0.0000000 0.0000000 0.0000000 0.0000000 0.2946490 0.0000000
## [20,] 0.0000000 0.2521357 0.0000000 0.0000000 0.0000000 0.3079538 0.0000000
## [21,] 0.0000000 0.0000000 0.2667370 0.0000000 0.0000000 0.2725395 0.4713217
## [22,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [23,] 0.0000000 0.0000000 0.0000000 0.3019367 0.0000000 0.0000000 0.0000000
## [24,] 0.2792742 0.0000000 0.0000000 0.2952429 0.5341605 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.2558707 0.2528379 0.2801818 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.2747528 0.2997911 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2524306 0.0000000 0.2659812
## [28,] 0.0000000 0.2350174 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.3078153 0.0000000 0.0000000 0.0000000 0.0000000 0.2334614 0.2440591
## [30,] 0.0000000 0.4758774 0.0000000 0.0000000 0.2562148 0.2739689 0.0000000
## [31,] 0.0000000 0.2660090 0.0000000 0.0000000 0.2268721 0.2663501 0.0000000
## [32,] 0.0000000 0.0000000 0.2857389 0.0000000 0.2391536 0.2620682 0.2550332
## [33,] 0.0000000 0.0000000 0.2486489 0.2722985 0.3272553 0.2379100 0.2699743
## [34,] 0.0000000 0.2356514 0.0000000 0.2849007 0.0000000 0.2897565 0.0000000
## [35,] 0.0000000 0.2390901 0.0000000 0.0000000 0.2543385 0.0000000 0.0000000
## [36,] 0.2396712 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.2947310 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.0000000 0.0000000 0.2483949 0.0000000 0.2829137 0.3003585 0.0000000
## [39,] 0.0000000 0.0000000 0.0000000 0.2162889 0.2487025 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.2829137 0.2487025 0.2756825 0.2470598 0.2248907
## [41,] 0.0000000 0.0000000 0.3003585 0.0000000 0.2470598 0.2582925 0.2697951
## [42,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2248907 0.2697951 0.3065565
## [43,] 0.0000000 0.0000000 0.2988757 0.0000000 0.0000000 0.2453635 0.2594873
## [44,] 0.0000000 0.0000000 0.0000000 0.0000000 0.3116738 0.2489935 0.2735793
## [45,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2466440 0.2580259 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2840201 0.0000000 0.2516939
## [47,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [48,] 0.0000000 0.2500576 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [49,] 0.0000000 0.0000000 0.2828667 0.0000000 0.0000000 0.2272447 0.2459713
## [50,] 0.0000000 0.0000000 0.2435046 0.2464494 0.0000000 0.2999738 0.2466795
## [51,] 0.0000000 0.0000000 0.2426711 0.0000000 0.0000000 0.2365202 0.2446381
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2458181
## [53,] 0.0000000 0.0000000 0.2815824 0.0000000 0.0000000 0.0000000 0.2894833
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,43] [,44] [,45] [,46] [,47] [,48] [,49]
## [1,] 0.2717584 0.2966454 0.2851948 0.0000000 0.0000000 0.0000000 0.2444049
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2756810 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2738666
## [5,] 0.0000000 0.0000000 0.0000000 0.2325594 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.2405936 0.0000000 0.0000000 0.2866948
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2617295
## [8,] 0.2408387 0.0000000 0.0000000 0.0000000 0.0000000 0.2769596 0.0000000
## [9,] 0.0000000 0.5127517 0.0000000 0.0000000 0.0000000 0.0000000 0.2901938
## [10,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2834598 0.0000000 0.0000000
## [11,] 0.2172437 0.2379614 0.2785166 0.2586527 0.0000000 0.2535016 0.2963600
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2606090 0.0000000 0.0000000
## [13,] 0.2713111 0.0000000 0.0000000 0.0000000 0.0000000 0.2697998 0.0000000
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.3173082 0.0000000
## [16,] 0.2802761 0.2469848 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [17,] 0.2807106 0.2483147 0.3126725 0.0000000 0.0000000 0.0000000 0.0000000
## [18,] 0.2915648 0.3024883 0.0000000 0.0000000 0.0000000 0.2501726 0.3020837
## [19,] 0.2196399 0.2697182 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [20,] 0.2730837 0.2422631 0.2689707 0.0000000 0.0000000 0.2659968 0.4806145
## [21,] 0.2812048 0.2928984 0.0000000 0.0000000 0.2396201 0.0000000 0.2737182
## [22,] 0.4654570 0.2821580 0.2790076 0.0000000 0.0000000 0.0000000 0.2749795
## [23,] 0.0000000 0.0000000 0.0000000 0.2899864 0.0000000 0.0000000 0.0000000
## [24,] 0.0000000 0.0000000 0.0000000 0.2749055 0.0000000 0.0000000 0.2204416
## [25,] 0.2575015 0.0000000 0.0000000 0.2973556 0.0000000 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.2753157 0.0000000 0.0000000 0.0000000
## [27,] 0.0000000 0.0000000 0.0000000 0.2747746 0.0000000 0.0000000 0.0000000
## [28,] 0.0000000 0.2812990 0.0000000 0.0000000 0.0000000 0.2543082 0.0000000
## [29,] 0.2709876 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2516631
## [30,] 0.2713046 0.2723324 0.2448459 0.0000000 0.0000000 0.0000000 0.2894443
## [31,] 0.3058427 0.2843532 0.2659988 0.0000000 0.0000000 0.0000000 0.4711804
## [32,] 0.2507519 0.3244484 0.2343823 0.0000000 0.0000000 0.0000000 0.2604830
## [33,] 0.2444418 0.2688493 0.2537622 0.0000000 0.0000000 0.0000000 0.2801802
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [35,] 0.2970957 0.0000000 0.2741421 0.0000000 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2500576 0.0000000
## [38,] 0.2988757 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2828667
## [39,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [40,] 0.0000000 0.3116738 0.2466440 0.2840201 0.0000000 0.0000000 0.0000000
## [41,] 0.2453635 0.2489935 0.2580259 0.0000000 0.0000000 0.0000000 0.2272447
## [42,] 0.2594873 0.2735793 0.0000000 0.2516939 0.0000000 0.0000000 0.2459713
## [43,] 0.2571194 0.2718033 0.2827480 0.0000000 0.0000000 0.0000000 0.2579508
## [44,] 0.2718033 0.2395361 0.2738135 0.0000000 0.2492086 0.2822983 0.3170337
## [45,] 0.2827480 0.2738135 0.2762778 0.0000000 0.2720076 0.0000000 0.2805374
## [46,] 0.0000000 0.0000000 0.0000000 0.3053590 0.0000000 0.0000000 0.2857754
## [47,] 0.0000000 0.2492086 0.2720076 0.0000000 0.6789209 0.2665814 0.2559346
## [48,] 0.0000000 0.2822983 0.0000000 0.0000000 0.2665814 0.2778976 0.4773986
## [49,] 0.2579508 0.3170337 0.2805374 0.2857754 0.2559346 0.4773986 0.2755538
## [50,] 0.2595335 0.3086691 0.2850858 0.0000000 0.2104410 0.2706938 0.4616169
## [51,] 0.2879015 0.2425835 0.2596604 0.0000000 0.0000000 0.0000000 0.0000000
## [52,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.2368557
## [53,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2719853 0.2675616 0.2692430
## [54,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [,50] [,51] [,52] [,53] [,54]
## [1,] 0.2918953 0.5172723 0.2842390 0.2785998 0.0000000
## [2,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [3,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [4,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2885930
## [5,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [6,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [7,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [8,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [9,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [10,] 0.2699155 0.0000000 0.0000000 0.0000000 0.0000000
## [11,] 0.2800078 0.3451510 0.2732410 0.0000000 0.0000000
## [12,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [13,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [14,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [15,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2778121
## [16,] 0.0000000 0.0000000 0.2916809 0.0000000 0.0000000
## [17,] 0.2679772 0.0000000 0.2384648 0.0000000 0.2565254
## [18,] 0.2859029 0.0000000 0.2911390 0.0000000 0.0000000
## [19,] 0.2720901 0.0000000 0.0000000 0.0000000 0.0000000
## [20,] 0.3099036 0.2950438 0.0000000 0.0000000 0.0000000
## [21,] 0.2893078 0.0000000 0.2449108 0.2786048 0.0000000
## [22,] 0.0000000 0.0000000 0.2637964 0.0000000 0.0000000
## [23,] 0.2894952 0.0000000 0.0000000 0.0000000 0.3017595
## [24,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [25,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [26,] 0.0000000 0.0000000 0.0000000 0.0000000 0.2656326
## [27,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [28,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [29,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [30,] 0.0000000 0.2410022 0.0000000 0.0000000 0.0000000
## [31,] 0.4749111 0.2621258 0.0000000 0.2846988 0.0000000
## [32,] 0.2464078 0.2715413 0.2561422 0.0000000 0.2924328
## [33,] 0.3002079 0.0000000 0.3033843 0.0000000 0.0000000
## [34,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [35,] 0.0000000 0.4739264 0.0000000 0.0000000 0.0000000
## [36,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [37,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [38,] 0.2435046 0.2426711 0.0000000 0.2815824 0.0000000
## [39,] 0.2464494 0.0000000 0.0000000 0.0000000 0.0000000
## [40,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [41,] 0.2999738 0.2365202 0.0000000 0.0000000 0.0000000
## [42,] 0.2466795 0.2446381 0.2458181 0.2894833 0.0000000
## [43,] 0.2595335 0.2879015 0.0000000 0.0000000 0.0000000
## [44,] 0.3086691 0.2425835 0.0000000 0.0000000 0.0000000
## [45,] 0.2850858 0.2596604 0.0000000 0.0000000 0.0000000
## [46,] 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
## [47,] 0.2104410 0.0000000 0.0000000 0.2719853 0.0000000
## [48,] 0.2706938 0.0000000 0.0000000 0.2675616 0.0000000
## [49,] 0.4616169 0.0000000 0.2368557 0.2692430 0.0000000
## [50,] 0.3347241 0.2627641 0.3099056 0.2603242 0.2996033
## [51,] 0.2627641 0.2478623 0.2712008 0.2686424 0.2383378
## [52,] 0.3099056 0.2712008 0.3243540 0.2625186 0.0000000
## [53,] 0.2603242 0.2686424 0.2625186 0.2883047 0.2429939
## [54,] 0.2996033 0.2383378 0.0000000 0.2429939 0.2622221Matching graph embeddings to multivariate normal distribution
parameters.3<-update.parameters(parameters,list(ae_type="ARGVA",
lambda_kl=1e-2))
embedding.model<-cluster.model.fit(parameters.3, net.list)
z<-extract.embeddings(embedding.model)
cl<-extract.clusters(embedding.model)
lo<-make.layout(z)
G.true<-extract.graphs(embedding.model)$A.true
plot.net(G.true,cl,layout=lo)
# Plot diagnostics with added variational KL divergence loss
plot.diagnostics(embedding.model)## Warning in melt(loss.log, id.vars = "epoch"): The melt generic in data.table
## has been passed a data.frame and will attempt to redirect to the relevant
## reshape2 method; please note that reshape2 is deprecated, and this redirection
## is now deprecated as well. To continue using melt methods from reshape2 while
## both libraries are attached, e.g. melt.list, you can prepend the namespace
## like reshape2::melt(loss.log). In the next version, this warning will become an
## error.
## Warning in melt(loss.log, id.vars = "epoch"): The melt generic in data.table
## has been passed a data.frame and will attempt to redirect to the relevant
## reshape2 method; please note that reshape2 is deprecated, and this redirection
## is now deprecated as well. To continue using melt methods from reshape2 while
## both libraries are attached, e.g. melt.list, you can prepend the namespace
## like reshape2::melt(loss.log). In the next version, this warning will become an
## error.
Simulate Networks from Variational Graph Auto-Encoder model
sim.graphs<-simulate.networks(embedding.model,nsim=30)
cl<-extract.clusters(embedding.model)
for (i in c(1,2,29,30)){
net<-sim.graphs$networks[[i]]
embedding<-sim.graphs$embeddings[[i]]
lo<-make.layout(embedding)
plot.net(net,cl,layout = lo)
}
